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Chronic pain is a major cause of disability worldwide. While acute pain may serve as a protective function, chronic pain and the associated changes in neural processing negatively impact function and quality of life. This neural plasticity may include changes to the autonomic nervous system (ANS) potentially detectable as changes in various physiological signals. Our aim is to evaluate differences in the physiological signals reflecting ANS changes, by comparing healthy subjects and patients with chronic low back pain during standardized pain stimuli. We extracted several features from photoplethysmography (PPG), electrodermal activity (EDA), and respiration, both at rest and during a repeated pinprick test. We found significant group differences in some PPG parameters at rest and in response to the repeated pinprick test. Chronic pain patients had consistently higher basal sympathetic activity, as well as a blunted autonomic response when subjected to nociceptive stimuli.